CDS

Accession Number TCMCG057C26007
gbkey CDS
Protein Id XP_018432662.1
Location join(26254645..26254806,26254901..26254941,26255027..26255079,26255779..26255923,26256110..26256166,26256280..26256394,26256472..26256927,26256998..26257054)
Gene LOC108805188
GeneID 108805188
Organism Raphanus sativus

Protein

Length 361aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577160.1
Definition PREDICTED: mRNA-decapping enzyme-like protein [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category AK
Description Dcp1-like decapping family
KEGG_TC -
KEGG_Module M00395        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12611        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000288        [VIEW IN EMBL-EBI]
GO:0000290        [VIEW IN EMBL-EBI]
GO:0000932        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031086        [VIEW IN EMBL-EBI]
GO:0031087        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCAGAACGGGAAGCTGGTCCCACCAAATATGGATCAGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGAATCGATCCTTTCATAGAGGAAATCCTTATCACAGCAGCTCACGTCACCTTCTATGAATTCAACATCGAGATTAGTCAATGGAGTCGTAAGGACGTTGAAGGGTCTTTGTTTGTTGTCAAAAGAAACAAACAACAACCTCGGTTTCAGTTTATTGTGATGAATCGTCGGAATACAGATAATCTGGTGGAAGATCTCCTGGGAGATTTTGAGTACGAAGTCCAAGGTCCATATTTACTTTACCGTAACGCATCTCAAGAAGTAAATGGCATTTGGTTCTACAATGAACGTGAATGTGTGGAGGTTGCACGTCTTTTCGACAGATTACTTAGCGCCTATTCCAAGGCAAACCAGAAGCCAAATACCTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATGGCGGCTATGGATGGTCCTCTTGAACCATCTTTAACTGCTAGAGATGCCCCTAATGATCCTGCTTTTGTCAACTTCTTTAGCTCTGCGATGGCTCTTGGGAACACTTCGAGTGGGACTTCAAGTGGACCACCATACCAATCATCACCAACTCCTCTACAACCTCACCAACCCACCGTTGCGCCTCCTGCACCTCCACAGCCTCTGCAATCCTCCTCTCCTATCATGCCTCACTTTGAGTACAACCCTGATCTTATCAATAGCAACCCCAGCGTTCAGATCGATCTGGTGACGCCGTCCTCGTTCTTTGCACCCCCACGGACGATGACACAACCACACCTTATTCCTAGTTCATCTACCCCCACTGCGCCTCCTCTGAACTTTAATAATGCGACTCACCATCAGCAGCGCCAGCATGGTACTCCGATGCTCCAGCCTTTCCCACCACCAAATCCACCACCCTCACTCGCTCCTCCTGCACAAAGTGTCCCAGTTATCAACAGAGACAAAGTCAAACAAGCTCTTTTGACGCTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAAAATGCACATCAACCATGA
Protein:  
MSQNGKLVPPNMDQNSTRLLNLTVLQRIDPFIEEILITAAHVTFYEFNIEISQWSRKDVEGSLFVVKRNKQQPRFQFIVMNRRNTDNLVEDLLGDFEYEVQGPYLLYRNASQEVNGIWFYNERECVEVARLFDRLLSAYSKANQKPNTSSSKSEFEELEAVPTMAAMDGPLEPSLTARDAPNDPAFVNFFSSAMALGNTSSGTSSGPPYQSSPTPLQPHQPTVAPPAPPQPLQSSSPIMPHFEYNPDLINSNPSVQIDLVTPSSFFAPPRTMTQPHLIPSSSTPTAPPLNFNNATHHQQRQHGTPMLQPFPPPNPPPSLAPPAQSVPVINRDKVKQALLTLVQENEFIDMVTRALQNAHQP